globalSettings {rNMR}  R Documentation 
The globalSettings
object stores the current set of global graphics and
plot settings as a named list (detailed below). The values for these parameters
are taken from defaultSettings
when rNMR loads.
offset 
numeric; the percent of total intensity range with which to displace each spectrum. This is used to create stacked 1D spectra and is not passed to 2D plots. 
position.1D 
numeric; the vertical position of 1D plots within the spectral window. 
filter 
function; a function used to create a 1D projection, must be
capable of being applied to a vector (e.g. 
proj.direct 
integer 
proj.mode 
logical; if 
proj.type 
specifies the type of projection to be generated;
" 
peak.disp 
logical; if 
peak.noiseFilt 
integer; peak picking filter. 
thresh.1D 
numeric; the peak picking threshold for 1D spectra. 
peak.pch 
integer or character; the symbol used for peak markers for
picked peaks. Equivalent to R's 
peak.cex 
numeric (positive); the magnification for peak labels and
markers for picked peaks. Equivalent to R's 
peak.labelPos 
justification for peak label text. Must be one of

roiMain 
logical; if 
roiMax 
logical; if 
roi.bcolor 
color setting for active and inactive ROI boxes. Must be
a vector of length two: 
roi.tcolor 
color setting for active and inactive ROI labels. Must be
a vector of length two: 
roi.lwd 
numeric; line width for ROI boxes. Equivalent to R's

roi.lty 
box type for active and inactive ROIs. Must be a vector of
length 2, 
roi.cex 
numeric (positive); text magnification for ROI labels.
Equivalent to R's 
roi.labelPos 
justification for ROI label text. Must be one of

roi.noiseFilt 
integer; filter for automatic ROI generation (see

roi.w1 
numeric; fixed size in the indirect dimension (in ppm) for ROIs
generated automatically using 
roi.w2 
numeric; fixed size in the direct dimension (in ppm) for ROIs
generated automatically using 
roi.pad 
numeric; padding percentage applied to ROIs generated
automatically using 
cex.roi.multi 
numeric (positive); the magnification for ROI labels in
the multiple file window (see 
cex.files.multi 
numeric (positive); the magnification for file names
in the multiple file window (see 
cex.roi.sub 
numeric (positive); the magnification for ROI labels in the
subplot window (see 
size.main 
numeric; the dimensions (in inches) for the main plot
window, of the form 
size.sub 
numeric; the dimensions (in inches) for the subplot window, of
the form 
size.multi 
numeric; the dimensions (in inches) for the multiple file
window, of the form 
mar 
numeric; the number of lines of margin space to be used in the main
plot window. See 
mar.sub 
numeric; the number of lines of margin space to be used in the
subplot window (in between ROI plots). Equivalent to R's 
mar.multi 
numeric; the number of lines of margin space to be used in
the multiple file window (in between ROI plots). Equivalent to R's

Ian A. Lewis ialewis@nmrfam.wisc.edu, Seth C. Schommer schommer@nmrfam.wisc.edu
rNMRobjects
for other other objects used by the
rNMR package; rNMRutils
for functions used for interacting
with rNMR objects.